PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10003034
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 450aa    MW: 47856.8 Da    PI: 7.1608
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10003034genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.45.5e-22301363163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  ++elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L +eN aLk+e+++lk+++++l+ e+
  Lus10003034 301 DRELKRERRKQSNRESARRSRLRKQAETEELARKVDALNNENLALKSEINQLKEKSDQLRVEN 363
                  689********************************************************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.8E-31197IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.3E-15130192No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-16299360No hitNo description
SMARTSM003384.4E-19301365IPR004827Basic-leucine zipper domain
PfamPF001702.3E-20302363IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.426303366IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-11304360No hitNo description
CDDcd147025.03E-21306357No hitNo description
PROSITE patternPS000360308323IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MGNNEDGKSS SKSEKSSSPP HTAPPEQANI HVYPDWAAMQ AYYGPRVALP PYYNPAVASG  60
HPPHPYMWAP PQHMMPHYGA PYAAIYPGGV YAHPAVPMGQ HPHGPGASAS PAVAVPPSAE  120
TPTKSSGNTD QSLMKKLKGF DGLAMSIGNG NGTAESGDGG DHRMSQSVDT EGSSDGSDGN  180
TAGGRKRSYE GRPAVGTVHS LLNCRGLVKL FNSFLGYNFQ SLLFLRGDLK TEGHPTDGSN  240
SSDKDGAVTV ASSRKSTTPL AVMKSSDPRT PSMTAAGNAP QPCGVVPSET WLQYPAANPN  300
DRELKRERRK QSNRESARRS RLRKQAETEE LARKVDALNN ENLALKSEIN QLKEKSDQLR  360
VENATLVDKL KTAELGQTQE IGWNNNNAAA DEQMGSADST ENLLSRVNNS SAACVEEEGN  420
VEDRNPPKSG AKLRQLLDAS PRADPVPAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1317323RRSRLRK
2317324RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012083267.11e-162PREDICTED: common plant regulatory factor 1-like isoform X1
SwissprotP427761e-111GBF3_ARATH; G-box-binding factor 3
TrEMBLA0A067K8C01e-162A0A067K8C0_JATCU; Uncharacterized protein
STRINGPOPTR_0002s16870.11e-143(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-108G-box binding factor 3